Topic: Genbank
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Answers to Common Questions
What is genbank
GenBank is the NIH genetic sequence database, an annotated collection of all publicly available DNA sequences. Read More »
Source: http://www.chacha.com/question/what-is-genbank
What does GENBANK stand for?
National Genetic Sequence Data Base Read More »
Source: http://acronyms.thefreedictionary.com/GENBANK
Why are there N's in sequences in GenBank, example :
The N's represent a gap in a contig sequence such as a Whole Genome Shotgun (WGS) sequence. An expand N's link may be clicked, to 'uncompress the N's' in order to see the entire sequence including the gap N's. Read More »
Source: http://www.ncbi.nlm.nih.gov/corehtml/query/static/nucprotfaq.html
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Genbank
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The TPA database consists of sequences that are derived/assembled from primary genomic and/or mRNA sequence that are already represented in the DDBJ/EMBL/GenBank Database. These sequence records include directly or indirectly experimentally...
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Source: http://www.ncbi.nlm.nih.gov/genbank/tpafaq.html
The GenBank archival sequence database includes publicly available DNA sequences submitted from individual laboratories and large-scale sequencing projects. GenBank accession numbers are assigned to these submitted sequences. Submitted sequ...
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Source: http://www.ncbi.nlm.nih.gov/projects/RefSeq/RSfaq.html
The WWW version of BLAST provides for searches of several predefined data sets that can be selected from the Database pull-down menu, including nr, month, dbest, htgs, swissprot, E.coli, yeast, and others. In addition, the Microbial Genomes...
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Source: http://www.ncbi.nlm.nih.gov/Web/Newsltr/Winter99/winter99.htm
The accession number is assigned to every GenBank record when it is submitted. It applies to the full record and does not change if parts of the record are modified, such as the publication information, feature annotations, or even sequence...
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Source: http://www.ncbi.nlm.nih.gov/Web/Newsltr/aug96.html
The date in the upper right-hand corner of a GenBank record, to the far right on the LOCUS line, is the date of last modification. In some cases, it might correspond to the first release date into GenBank or when the record was last updated...
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Source: http://www.ncbi.nlm.nih.gov/corehtml/query/static/nucprotfaq.html
To find out the approximate date on which a GenBank record was first released, send an email message, with the accessions of interest, to the NCBI general Service Desk address which is info@ncbi.nlm.nih.gov .
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Source: http://www.ncbi.nlm.nih.gov/corehtml/query/static/nucprotfaq.html