Topic: Rasmol
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Answers to Common Questions
What is RasMol?
RasMol is a good viewer for showing PDB-formatted files, it may be the most widely used three-dimensional molecular graphics viewer in the world. It is available for almost all current platforms including UNIX, Windows and Macintosh. On the... Read More »
Source: http://www.ncbi.nlm.nih.gov/Structure/CN3D/rasmol.html
How can I obtain RasMol?
Roger Sayle's RasMol can be obtained from the download page at the RasMol Home Page , a service maintained by Eric Martz. There you will find tutorial information, the RasMol manual and a Discussion List where you can ask questions about Ra... Read More »
Source: http://www.ncbi.nlm.nih.gov/Structure/CN3D/rasmol.html
How do I set up my WWW Browser to Launch RasMol?
If you are using WWW Entrez, you can set-up your WWW browser to launch the 3D viewing sofware automatically. See our guide to installing a structure viewer for details. Read More »
Source: http://www.ncbi.nlm.nih.gov/Structure/CN3D/rasmol.html
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Answers to Other Common Questions
The proper binary for 32-bit displays is rasmol_32bit .If you define an alias ( alias rasmol='rasmol_32bit' )in your ~/.bashrc file, you can simply use rasmol .In addition, you need to specify the location of the Rasmol help file. Add thisl...
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Source: http://ariadne.mse.uiuc.edu/Info/Misc/faq.html
Hi Can anyone help me install RasMol2.7.4 on my Hardy-Heron please. I edited the "Imakefile" for pixel depth and tried to compile but I am getting error in line 220 saying missing seperator. Any help would be appreciated. Many thanks
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Source: http://ubuntuforums.org/showthread.php?t=517127
RasMol scripts allow you to keep complex views that might take too long to create on the fly in the classroom. But if you move them to a different directory or computer after you create them, they probably will not work. Here's how to modif...
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Source: http://spdbv.vital-it.ch/TheMolecularLevel/Goodies/PortScrpt.html
Launch RasMol from your "SMART Team Folder". Find "Open," in the top menu bar and click it. A window will open to find the file you wish to open. If you have launched RasMol from your SMART Team Folder, this is where the "Open" window will ...
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Source: http://cbm.msoe.edu/stupro/smart/smartfaq.html
In the "Select Molecular Coordinate File", tell RASMOL to list all files of the type "MOPAC File Format"; (3) In "Look in" go to the proper folder and find your .mop file. (2) The .mop file of interest now appears. Choose it and press OK. (...
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Source: http://www.scielo.br/scielo.php?pid=S0103-50532009000900011&scrip...
On Windowsplatforms copy the script and paste it into a text editor. Save the scriptas a text file (so that it has the .txt extension), and place it in thesame folder as RasMol. Load the molecule you wish to examine into RasMol,then type sc...
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Source: http://www.cecalc.ula.ve/BIOINFORMATICA/BIOTUTOR/javascript/faq.h...
