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MOTIVATION: Protein homology detection and sequence alignment are at the basis of protein structure prediction, function prediction and evolution. ... SVM-HUSTLE--an iterative semi-supervised machine learning approach for pairwise protein remote homology detection.
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Protein homology detection using string alignment kernels. ... MOTIVATION: Remote homology detection between protein sequences is a central problem in computational biology. Discriminative methods involving support vector machines (SVMs) are currently the most effective methods for the problem of superfamily recognition in...
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We test the method on two remote homology detection tasks: prediction of a previously unseen SCOP family and prediction of an enzyme class given other enzymes that have a similar function on other substrates.
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We then apply this approach to assess the accuracy of a range of publicly available methods for remote homology detection including several profile–profile methods (COMPASS, HHSearch, PRC) from two perspectives.
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Protein remote homology detection and fold recognition are central problems in computational biology. Supervised learning algorithms based on support vector ...
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Please send feedback to: soeding AT lmb.uni-muenchen.de ... Show results of job: ... PDBalert automatic remote homology tracking and structure prediction...
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Motivation: Remote homology detection between protein sequences is a central problem in computational biology. Supervised learning algorithms based on support vector machines are currently the most effective method for remote homology detection.
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Remote homology detection between protein sequences is a central problem in computational biology. ... Abstract: Remote homology detection between protein sequences is a central problem in computational biology. Supervised learning algorithms based on support vector machines are currently the most effective method for...
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Detection and assessment of similarity between distantly related sequences by means of a variety of remotely-executable software - from the Swiss Inst. for Experimental Cancer Research. ... Directory Help; Search only in Homology DetectionSearch the Web...
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A significant challenge in homology detection is to identify sequences that ... Remote homology detection is the problem of identifying sequences with a ...
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