This list of RNA structure prediction software is a compilation of software tools
and web portals used for RNA structure prediction.
The Predict a Secondary Structure server combines four separate prediction and
... This server takes a sequence, either RNA or DNA, and creates a highly ...
RNAstructure is a software package for RNA secondary structure prediction and
analysis. It uses thermodynamics and utilizes the most recent set of nearest ...
May 16, 2001 ... Alignment example: Sequence example: ANMF
CGCGGGGTAGAGCAGCCTGGTAGCTCGTCGGGCTCATA AQTRNF ...
Methods Mol Biol. 2012;905:99-122. doi: 10.1007/978-1-61779-949-5_8. RNA
structure prediction: an overview of methods. Seetin MG(1), Mathews DH.
RNAsoft - Software for RNA/DNA secondary structure prediction and design ...
AveRNA combines the RNA secondary structures predicted by different ...
RNA Secondary Structure Prediction with Pseudoknots. Enter job ID to retrieve
results of previous submission: Select Input Format. Raw Sequence demo
Here, we surveyed desktop applications, web applications, cloud computing tools
, libraries for predicting RNA structures.
IntaRNA enables the prediction of RNA-RNA interactions. ... Thus, LocARNA
aligns RNAs with unknown structure and predicts a consensus secondary
Basics of RNA structure prediction. • Two primary methods of structure prediction.
– Covariation analysis/Comparative sequence analysis. • Takes into account ...