This list of RNA structure prediction software is a compilation of software tools
and web portals used for RNA structure prediction.
The Predict a Secondary Structure server combines four separate prediction and
... This server takes a sequence, either RNA or DNA, and creates a highly ...
RNA Folding Form · DNA Folding Form · Structure Display and Free Energy ...
2000 to November 5, 2010, when it was relocated to the RNA Institute web site.
RNAsoft - Software for RNA/DNA secondary structure prediction and design ...
AveRNA combines the RNA secondary structures predicted by different ...
The input to the network is the mutual information, the fraction of complementary
nucleotides, and a novel consensus RNAfold secondary structure prediction of ...
Methods Mol Biol. 2012;905:99-122. doi: 10.1007/978-1-61779-949-5_8. RNA
structure prediction: an overview of methods. Seetin MG(1), Mathews DH.
Mar 15, 2010 ... RNA secondary structure prediction, using thermodynamics, can be used to
develop hypotheses about the structure of an RNA sequence.
IntaRNA enables the prediction of RNA-RNA interactions. ... Thus, LocARNA
aligns RNAs with unknown structure and predicts a consensus secondary
Basics of RNA structure prediction. • Two primary methods of structure prediction.
– Covariation analysis/Comparative sequence analysis. • Takes into account ...
Thermodynamic Structure Prediction. RNAfold Server ...predicts minimum free
energy structures and base pair probabilities from single RNA or DNA sequences